Gastrointestinal Infections

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Oral thrush (Candidiasis)

A fungal infection of the buccal mucosa caused by Candida species. White plaques are seen on the tongue, cheeks, or roof of the mouth. Risk factors include immunosuppression such as HIV infection or diabetes, the use of inhaled steroids, concurrent antibiotics, or poor oral hygiene.

Antimicrobial 

Nystatin oral suspension 100,000U (1mL) PO QID after food. Place under the tongue or in the buccal cavity then swallow.

Comments and Duration of Therapy 

Duration:

Treat for 7-14 days or until several days after symptoms have resolved.

See Candida Oesophagitis in Chapter 9: Gastrointestinal infections, Cutaneous Candidiasis in Chapter 13: Skin and Soft Tissue Infection and Vulvovaginal Candidiasis in Chapter 17: Women’s Health

Candida Oesophagitis

Most commonly seen in the setting of immunosuppression.

Test all patients for HIV.

Antimicrobial

For asymptomatic patients who are not immunocompromised:

Nystatin tablet 500,000U PO QID

OR

Nystatin oral suspension 100,000U (1mL) PO QID

For symptomatic or immunocompromised patients:

Fluconazole 200mg for first dose (child 6mg/kg), followed by 100mg daily (child 3mg/kg)

Comments and Duration of Therapy 

Duration:

For asymptomatic patients who are not immunocompromised: Treat for 10-14 days
For symptomatic or immunocompromised patients: Treat for 14-21 days. For refractory infection: Extend treatment to 28 days

See Oral thrush (Candidiasis) in Chapter 9: Gastrointestinal infections, Cutaneous Candidiasis in Chapter 13: Skin and Soft Tissue Infection, and Vulvovaginal Candidiasis in Chapter 17: Women’s Health

Diarrhoeal diseases

An increased frequency of liquid or semi liquid stools. Antibiotic therapy is ONLY indicated when bacterial infection is suspected, such as with high fever, tachycardia, leukocytosis, abdominal tenderness, severe abdominal pain, or blood in the stool. If this occurs, see Severe Dysentery below.

Antimicrobial 

Most diarrhoeal disease does not require antibiotic therapy.

The major concern with diarrhoea is a rapid loss of fluid and risk of dehydration. Oral and/ or intravenous rehydration is usually all that is required.

Comments and Duration of Therapy 

In acute diarrhea send stool for rotavirus testing. Stool cultures should be reserved for grossly bloody stool, severe dehydration, signs of inflammatory disease, symptoms lasting more than 3-7 days, immunosuppression, and suspected nosocomial infections. Blood cultures should be obtained from infants <3 months of age, people of any age with signs of septicemia or when enteric fever is suspected, people with systemic manifestations of infection, and in people who are immunocompromised.

Severe dysentery

Severe diarrhoea associated with blood and mucous. Commonly caused by Salmonella or Shigella species, or Entamoeba histolytica. Treatment is especially required in infants less than 12 months old because of the risk of bacteraemia and other systemic manifestations.

Antimicrobial 

Ceftriaxone 2g (child: 50mg/kg) IV OD

PLUS

Metronidazole 500mg (child: 10mg/kg) PO/ IV TID

Change to oral antibiotics when improving according to susceptibility testing. If no susceptibilities available use:

Co-trimoxazole 160/800mg (child: 4+20mg/ kg) PO BID

PLUS

Metronidazole 500mg (child: 10mg/kg) PO TID

Alternative:

Ciprofloxacin 500mg (child: 10mg/kg) PO BID

Comments and Duration of Therapy 

Send stool for microscopy (including ova, cysts and parasites), culture and susceptibility testing.

Rehydration and electrolyte replacement are the most important component of treatment.

Duration:

Treat for 3-5 days

If enteric fever is suspected or confirmed See Typhoid (enteric fever) in Chapter 9: Gastrointestinal Infections.
If intestinal amoebiasis is suspected see
Intestinal Amoebiasis in Chapter 9: Gastrointestinal Infections.

Intestinal Amoebiasis

Invasion of the intestinal lining by Entamoeba histolytica trophozoites causes amoebic bloody diarrhoea or colitis. Severe colitis may be complicated by perforation.

Antimicrobial

Metronidazole 500mg (child: 10mg/kg) PO TID

Comments and Duration of Therapy 

Currently luminal amoebicides to eliminate cysts in the colon are not available on the Timor-Leste essential drugs list (e.g. Paromomycin, Diloxanide). The risk of relapse is increased without their use.

Duration:

Metronidazole: Treat for 7-10 days

Liver Abscess

A collection of pus inside the liver. Symptoms and signs include fever, lethargy, right upper quadrant discomfort, anorexia, a large and tender liver, and pleural effusion.

If not responding to antibiotics, or if abscess >5cm seek surgical opinion regarding drainage.

Antimicrobial

Amoebic:

Metronidazole 500mg (child: 10mg/kg) PO/ IV TID

Bacterial:

Ceftriaxone 2g (child: 50mg/kg) IV OD

PLUS

Metronidazole 500mg (child: 10mg/kg) PO/ IV TID

Change to oral antibiotics after 2 weeks. If susceptibilities are not available use: Amoxicillin/Clavulanic acid 500/125mg (child 25/6.25 mg/kg) PO TID

Comments and Duration of Therapy 

Blood cultures should be collected in all patients with liver abscess, prior to antibiotics where possible. If abscess is drained, send pus for culture. Ultrasound or CT is required for diagnosis.

Duration:

Amoebic: Treat for 7-10 days
Bacterial: Change to oral antibiotics after 2 weeks if patient is well. Treat for a total of 6 weeks.

Currently luminal amoebicides to eliminate cysts in the colon (e.g. paromomycin) are not on the Timor-Leste essential drugs list. The risk of relapse is increased without their use.

Giardiasis

Often characterised by yellow diarrhoea, excess gas, stomach or abdominal cramps, and/or nausea.

Antimicrobial 

Metronidazole 500mg (child: 10mg/kg) PO TID

Comments and Duration of Therapy

Duration:

Metronidazole: Treat for 5-7 days.

Strongyloidiasis

Uncomplicated disease is frequently asymptomatic or may involve gastrointestinal symptoms include abdominal pain or diarrhoea. Pulmonary symptoms can occur during the pulmonary migration phase. Dermatological manifestations include urticarial rashes and Larva Currens.

Antimicrobial

For immunocompetent patients:

Albendazole 400mg (child ≤10kg 200mg) PO BID for 3 days. Repeat after 7 days

Alternative (for adult or child >15kg):

Ivermectin 200mcg/kg PO with fatty food for 1 dose. Repeat 7 days later.

For immunocompromised patients with uncomplicated disease:

Ivermectin (adult and child >15kg) 200mcg/kg PO with fatty food on days 1, 2, 15 and 16.

For patients with disseminated Strongyloidiasis:

Ivermectin (adult and child >15kg) 200mcg/kg PO with fatty food daily until symptoms resolve and stool or sputum microscopy demonstrates clearance of larvae.

Followed by:

Ivermectin on days 7 and 8 after completion of daily therapy.

Comments and Duration of Therapy 

Diagnosis of Strongyloides depends on microscopic identification of larvae in the stool, or in sputum in disseminated infection. The diagnosis may be supported by the presence of eosinophilia in the blood.

Disseminated Strongyloidiasis occurs when patients with chronic Strongyloidiasis become immunosuppressed. This can be rapidly fatal. For patients with disseminated Strongyloidiasis reduce immunosuppression if possible.

Ivermectin should not be given to children <15kg and should not be used in pregnancy. Round up doses to the nearest 1.5mg.

Antibiotic-associated diarrhoea

Most antibiotic-associated diarrhoea is a side effect of the medication, while only a small proportion of antibiotic-associated diarrhoea is caused by Clostridium difficile.

Antimicrobial 

Cease other antibiotics if possible.

If Clostridium difficile is confirmed or strongly suspected use:

Metronidazole 500mg (child: 10mg/kg) PO BID

For recurrent or refractory Clostridium difficile:

Vancomycin 125mg (child 10mg/kg) PO, QID (IV formulations of vancomycin can be given orally for this indication)

Comments and Duration of Therapy 

Send stool for culture and specifically request Clostridium difficile testing.

Duration:

Treat Clostridium difficile infections for 10 days.

Typhoid (enteric fever)- proven or suspected

Caused by ingestion of contaminated water or transmitted by poor hygiene practices during food handling. Typhoid may be suspected in the presence of fever >38 degrees for >3 days, and can be associated with a dry cough, bowel changes (constipation in adults, diarrhoea in children), headache, malaise, cough, or rash.

Antimicrobial 

Ceftriaxone 2g (child: 50mg/kg) IV OD

Alternative:

Azithromycin 1g (child 20mg/kg) PO OD

Step down to oral antibiotics when well according to susceptibilities. If susceptibility results are not available use:

Azithromycin 1g (child 20mg/kg) PO OD

OR

Ciprofloxacin 500mg (child 12.5mg/kg) PO BID

Comments and Duration of Therapy 

Send blood cultures prior to antibiotics. Send stool culture.

Duration:

Change to oral antibiotics when improving. Treat for a total of 7-10 days.

Helminths: Hookworm, Roundworm, Whipworm

Antimicrobial

Albendazole 400mg PO OD

Alternative:

(In Pregnancy) Pyrantel 250mg PO OD

Comments and Duration of Therapy 

Duration:

Adults and children > 2 years: Treat for 3 days. If heavy infection repeat after 7 days.
Children 1-2 years: Single dose only.

Helicobacter pylori

Patients infected with H. pylori have a 10-20% lifetime risk of developing peptic ulcers and a 1-2% risk of developing stomach cancer.

Antimicrobial

Optimum therapy if available:

Omeprazole 20mg PO BID

PLUS

Amoxicillin 1g PO BID

PLUS

Clarithromycin 500mg PO BID

Alternative:

Omeprazole 20mg PO BID

PLUS

Amoxicillin 1gram PO BID

PLUS

Metronidazole 500mg PO BID

Comments and Duration of Therapy 

All patient with a duodenal ulcer, proven H. pylori peptic ulcers or with MALT should be treated.

Duration:

Treat for 10-14 days

Chronic Hepatitis B

The indications for treatment include HBV DNA 2000 IU/ ml, elevated ALT, and/or cirrhotic patients with detectable HBV DNA.

Antimicrobial 

Tenofovir dipovoxil fumarate (TDF) 300 mg PO OD

Comments and Duration of Therapy 

Perform creatinine clearance at baseline.
Perform creatinine clearance, serum phosphate, urine glucose, and protein at least annually.

Test all patients for HIV.
Patients with concurrent HIV should be treated with an anti-retroviral regime with activity against HBV.

Spontaneous bacterial peritonitis (SBP)

Usually a complication of large volume ascites in patients with cirrhosis. Most common pathogens are gram negative organisms including E. coli and Klebsiella spp. In children Streptococcus pneumoniae is the most common cause. Suspect in patients with ascites whose clinical status deteriorates. SBP is diagnosed when total ascitic white cell count is 500 cells/μL, or neutrophil count is 250 cells/μL.

Antimicrobial

Ceftriaxone 2g (child 50mg/kg) IV OD

Alternative:

Ciprofloxacin 500mg (child 10mg/kg) PO BID

Comments and Duration of Therapy 

Take blood cultures. Perform ascitic tap and send fluid for chemistry, cell count and culture (fluid for culture should be injected into blood culture bottles to increase yield). Request AFB and GeneXpert if TB peritonitis is suspected.

Change antibiotics according to culture and susceptibility results.

Duration:

If there is rapid clinical improvement stop antibiotics after 5 days.

See Cirrhosis, antibiotic prophylaxis in Chapter 1: Antibiotic prophylaxis for prophylaxis following first episode of SBP in patients with cirrhosis.

 

References

Clinical practice guidelines panel, European Association for the Study of the Liver. EASL 2017 Clinical practice guidelines on the management of hepatitis B virus infection. J Hepatol 2017; 67:370-398

eTG complete. Acute Infectious Diarrhoea. In: Therapeutic Guidelines [digital]. Melbourne: Therapeutic Guidelines Limited; 2019. http://www.tg.org.au

eTG complete. Gastrointestinal helminths (worms). In: Therapeutic Guidelines [digital]. Melbourne: Therapeutic Guidelines Limited; 2019. http://www. tg.org.au

eTG complete. Liver Abscess. In: Therapeutic Guidelines [digital]. Melbourne: Therapeutic Guidelines Limited; 2019. http://www.tg.org.au

eTG complete. Oesophageal candidiasis. In: Therapeutic Guidelines [digital]. Melbourne: Therapeutic Guidelines Limited; 2019. http://www.tg.org.au

Gusmao dos Santos C, Francis J, Guterres J, Janson S, Lopes N, Marr I, et al. HNGV Antibiotic guidelines writing group. Antibiotic guidelines Hospital Nacional Guideo Valadares. Timor-Leste; 2016

Pappas P, Kauffman C, Andes D, Clancy C, Marr K, Ostrosky-Zeichner L, et al. Clinical Practice Guidelines for the management of candidiasis: 2016 update by the Infectious Diseases Society of America. Clin Infect Dis 2016; 62(4):e1-e50. https://doi.org/10.1093/cid/civ933

Shah S, Iyer P, Moss S. AGA Clinical practice update on the management of refractory Helicobacter pylori infection: expert review. Gastroenterology 2021; 160(5):1831-1841. Doi: 10.1053/j.gastro.2020.11.059

Terrault N, Lok A, McMahon B, Chang K-M, Hwang J, Jonas M et al. Update on prevention, diagnosis, and treatment of chronic hepatitis B: AASLD 2018 hepatitis B guidance. Hepatology 2018; 67 (4):1560-1599